Jeffrey Sosa-Calvo Archives | Âé¶ąÓł»­´«Ă˝ News Central Florida Research, Arts, Technology, Student Life and College News, Stories and More Wed, 22 Apr 2026 13:15:53 +0000 en-US hourly 1 https://wordpress.org/?v=6.9.4 /wp-content/blogs.dir/20/files/2019/05/cropped-logo-150x150.png Jeffrey Sosa-Calvo Archives | Âé¶ąÓł»­´«Ă˝ News 32 32 Âé¶ąÓł»­´«Ă˝ Researcher Contributes to Antscan, a Global 3D Ant Biodiversity Database /news/ucf-researcher-contributes-to-antscan-a-global-3d-ant-biodiversity-database/ Wed, 22 Apr 2026 13:00:38 +0000 /news/?p=152520 Using an advanced X-ray technique, Assistant Professor of Biology Jeffrey Sosa-Calvo has helped create detailed images of 2,000 ant specimens, offering insight on their physical traits to advance science and even the arts.

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Since the rise of genome sequencing, the field of biology has gained an exponential amount of data and understanding of the building blocks of living organisms. However, documenting phenotypic, or observable, characteristics of organisms has lagged behind due to challenges with technology.

To advance knowledge in this area, Âé¶ąÓł»­´«Ă˝ Assistant Professor of Biology , collaborated with international researchers through the Antscan, a global initiave led by the Okinawa Institute of Science and Technology (OIST) and Karlsruhe Institute of Technology (KIT), with contributions from universities and museums.

The effort has led to a Nature Methods publication and created a freely available, morphological database of over 2,000 ant specimens representing nearly 800 species.

“Ants are important to study because they are ubiquitous, abundant and highly varied, ecologically dominant, and some species practice agriculture, facing challenges similar to human agriculture, such as crop pests,” says Sosa-Calvo, who began researching insect diversity at the Smithsonian National Museum of Natural History and the University of Maryland.

Using a fast and powerful X-ray scanning technique, researchers created phenotypically accurate 3D models, providing a detailed look at both ants’ external and internal anatomy that can benefit a wide range of fields.

“There is strong potential for more ant species to be added to Antscan and that other small insect or invertebrate groups create similar repositories of phenotypic data to advance our understanding of biological morphology,” Sosa-Calvo says.

Closing the Gap Between Genetic and Morphological Data

Standard imaging tools used to photograph specimens, like high-resolution cameras, can capture the external morphology of ants from multiple angles, and micro-CT scanning can capture the internal morphology like organs and muscle tissue. However, these methods are time-consuming and limit how many specimens can be studied.

The Antscan initiative is filling this gap of available data by providing a library of morphologically accurate 3D models of ant anatomy. To solve the throughput bottleneck, the team of researchers is using high-throughput X-ray micro-CT scanning powered by a synchrotron particle accelerator.

Diagram illustrating the AntScan imaging process, including sample preparation, X-ray microscopy setup, and high-resolution scans used to create layered 3D models of ants.
From specimen preparation to scanning and image processing, Antscan uses advanced X-ray technology to create detailed 3D models of ants that are made publicly available online. (Photo courtesy of Katzke et al., 2026)

“The synchrotron particle accelerator produces much higher intensity light beams, resulting in images with higher contrast and faster processing times than a normal micro-CT scanner,” Sosa-Calvo says. “It takes about 3,000 images per specimen in a short period of time. So instead of taking most of the day to scan a single specimen, researchers can scan a single ant in about a minute or so.”

Once the 2D images are captured, they are reconstructed into a 3D tomogram of the specimen, allowing researchers to see fine details from the exoskeleton to internal structures like the nervous system.

Why This Tech Matters for Biodiversity Research

By streamlining the process of scanning smaller specimens and making the 3D models publicly available, the Antscan initiative has opened the door for researchers to study morphology at a scale previously only possible for genetic data, helping morphological research catch up with its molecular counterpart.

Composite image of an ant showing its external form and internal anatomy, including color-coded organs revealed through 3D imaging.
A 3D rendering of an Antscan specimen, the South American army ant (Eciton hamatum), highlighting internal anatomy, including muscles and organs. (Photo courtesy of Katzke et al., 2026)

It has also helped document the presence of characteristics previously thought to occur in only a single species.

“A few years ago, we discovered that fungus-farming ants—a group of ants that grow fungus for food and are the subject of Sosa-Calvo’s research at Âé¶ąÓł»­´«Ă˝â€”have biomineralized armor that protects them like the shell of marine crustaceans and mollusks,” he says. “With the scans performed in this project, we now know that other species, within fungus-farming ants also have this armor, which appears to be a unique feature among ants.”

Circular phylogenetic tree illustrating relationships among ant species, with labeled subfamilies and surrounding images of representative ants highlighting diversity across the group.
Antscan maps the diversity of ants across the tree of life, highlighting species included in the dataset as the open database continues to grow. (Credit: Katzke et al., 2026)

Applications in Art and Media

Scientists aren’t the only group that benefits from this extensive library. Since the files are open to the public, Sosa-Calvo says artists are using them to better understand and animate natural ant movement and is a valuable tool for education by engaging students.

He adds that this proven method of collecting morphological data could encourage researchers to generate similar databases, including other Hymenopteran groups, such as wasps andbees, as well as other insect groups like beetles, and other invertebrates.

Sosa-Calvo’s work contributed expertise on insect diversity, particularly within the order Hymenoptera, which includes ants, bees, and wasps. His research focuses on fungus-farming ants, a group known for their highly organized, cooperative colonies and unique agricultural behavior, or fungiculture.


This research was supported by the U.S. National Science Foundation (DEB-1927161).

Researchers and students in the Department of Biology within Âé¶ąÓł»­´«Ă˝â€™s College of Sciences, including the Sosa-Calvo Ant Lab, have contributed to the Antscan initiative.

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Antscan 2 From specimen preparation to scanning and image processing, Antscan uses advanced X-ray technology to create detailed 3D models of ants that are made publicly available online. (Credit: Katzke et al., 2026) Antscan 3 3D rendering of an Antscan specimen, the South American army ant (Eciton hamatum), highlighting internal anatomy, including muscles and organs. (Credit: Katzke et al., 2026) Antscan 4 Antscan maps the diversity of ants across the tree of life, highlighting species included in the dataset as the open database continues to grow. (Credit: Katzke et al., 2026)